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Publications

Martin D’Agostino · Research & publications

Publications

Books, journal articles, research reports and doctoral research by Martin D’Agostino and collaborators.

2026

2025

Research article

Multicentre Collaborative Trial Evaluation of a Method for Detection of Hepatitis E Virus in Pork Liver, Modified to Contain an Internal Amplification Control

Food Analytical Methods, 18, 710–716, 2025.

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Authors & citation

Martin D’Agostino; Liam O’Connor; Dima Semaan; B. Choudhury; S. Grierson; D. Jones; S. Martin-Latil; S. Perelle; D. Rodriguez-Lazaro; A. Sansom; E. Suffredini; Nigel Cook; Linda Scobie
Food Analytical Methods, 18, 710–716, 2025.

2023

Research article

Navigating the UKAS Accreditation Process for Detecting Norovirus and Hepatitis A Virus in Fresh and Frozen Produce: a Case Study

Food Analytical Methods, 16, 1711–1723, 2023.

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Martin D’Agostino
Food Analytical Methods, 16, 1711–1723, 2023.

Research article

Short Communication: Stability of “Free” Norovirus RNA on Fresh Produce

Food Analytical Methods, 16, 1498–1502, 2023.

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Martin D’Agostino
Food Analytical Methods, 16, 1498–1502, 2023.

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Research report

Optimising extraction and RT-qPCR-based detection of hepatitis E virus (HEV) from pork meat and products (HEVDETECT)

Food Standards Agency, research project FS307033, 2023.

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Martin D’Agostino; Nigel Cook; Liam O’Connor; Annette Sansom; Dima Semaan; Anne Wood; Stephanie Keenan; Linda Scobie
Food Standards Agency, research project FS307033, 2023.

PhD thesis

Norovirus in fresh produce: implications for the food industry and its regulators

PhD thesis, University of Liverpool, 2023.

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Martin D’Agostino
PhD thesis, University of Liverpool, 2023.

2022

Review article

Real-Time PCR-Based Methods for Detection of Hepatitis E Virus in Pork Products: A Critical Review

Microorganisms, 10(2), 428, 2022.

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Nigel Cook; Martin D’Agostino; Anne Wood; Linda Scobie
Microorganisms, 10(2), 428, 2022.

Journal article

An In vitro dimerization assay for the adverse outcome pathway approach in risk assessment of human estrogen receptor α-mediated endocrine-disrupting chemicals

In: Chemosphere, vol. 290, 2022.

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Lee, S. -H.; Seo, H.; Seo, H.; Lazari, M.; D’Agostino, M.; Byrd, N.; Yoon, K. S.; Lee, H. -S.; Park, Y.
In: Chemosphere, vol. 290, 2022.

2021

Research article

Detection of Hepatitis A Virus in Strawberries Implicated in an Outbreak in the USA in 1997

Food and Environmental Virology, 13(3), 421–422, 2021.

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Nigel Cook; L. Vickers-Smith; Martin D’Agostino
Food and Environmental Virology, 13(3), 421–422, 2021.

2019

Journal article

Prevalence of Norovirus in produce sold at retail in the United Kingdom

In: Food Microbiology, vol. 79, pp. 85-89, 2019.

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Cook, N.; Williams, L.; D’Agostino, M.
In: Food Microbiology, vol. 79, pp. 85-89, 2019.

2018

Book chapter

Molecular identification of enteric viruses in fresh produce

In: Molecular Techniques in Food Biology: Safety, Biotechnology, Authenticity and Traceability, pp. 409–422. Wiley, 2018.

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Martin D’Agostino; Nigel Cook
In: Molecular Techniques in Food Biology: Safety, Biotechnology, Authenticity and Traceability, pp. 409–422. Wiley, 2018.

Journal article

Critical review of methods for risk ranking of food-related hazards, based on risks for human health

In: Critical Reviews in Food Science and Nutrition, vol. 58, no. 2, pp. 178-193, 2018.

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der Fels-Klerx, H. J. Van; Asselt, E. D. Van; Raley, M.; Poulsen, M.; Korsgaard, H.; Bredsdorff, L.; Nauta, M.; D’Agostino, M.; Coles, D.; Marvin, H. J. P.; Frewer, L. J.
In: Critical Reviews in Food Science and Nutrition, vol. 58, no. 2, pp. 178-193, 2018.

2017

Journal article

Potential Approaches to Assess the Infectivity of Hepatitis E Virus in Pork Products: A Review

In: Food and Environmental Virology, vol. 9, no. 3, pp. 243-255, 2017.

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Cook, N.; D’Agostino, M.; Johne, R.
In: Food and Environmental Virology, vol. 9, no. 3, pp. 243-255, 2017.

Journal article

Virological Quality of Irrigation Water in Leafy Green Vegetables and Berry Fruits Production Chains

In: Food and Environmental Virology, vol. 9, no. 1, pp. 72-78, 2017.

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Kokkinos, P.; Kozyra, I.; Lazic, S.; Söderberg, K.; Vasickova, P.; Bouwknegt, M.; Rutjes, S.; Willems, K.; Moloney, R.; de Roda Husman, A. M.; Kaupke, A.; Legaki, E.; D’Agostino, M.; Cook, N.; von Bonsdorff, C. -H.; Rzeżutka, A.; Petrovic, T.; Maunula, L.; Pavlik, I.; Vantarakis, A.
In: Food and Environmental Virology, vol. 9, no. 1, pp. 72-78, 2017.

2016

Journal article

An immunomagnetic separation/loop-mediated isothermal amplification method for rapid direct detection of thermotolerant Campylobacter spp. during poultry production

In: Journal of Applied Microbiology, vol. 120, no. 2, pp. 469-477, 2016.

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Romero, M. R.; D’Agostino, M.; Arias, A. P.; Robles, S.; Casado, C. F.; Iturbe, L. O.; Lerma, O. G.; Andreou, M.; Cook, N.
In: Journal of Applied Microbiology, vol. 120, no. 2, pp. 469-477, 2016.

Book chapter

PCR-based methods for detection of foodborne bacterial pathogens in dairy products

In: Safety Analysis of Foods of Animal Origin, pp. 811-821, 2016.

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Whiting, I.; Cook, N.; Hernández, M.; Rodríguez-Lázaro, D.; D’Agostino, M.
In: Safety Analysis of Foods of Animal Origin, pp. 811-821, 2016.

Journal article

Validation of a Loop-Mediated Amplification/ISO 6579-Based Method for Analysing Soya Meal for the Presence of Salmonella enterica

In: Food Analytical Methods, vol. 9, no. 11, pp. 2979-2985, 2016.

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D’Agostino, M.; Robles, S.; Hansen, F.; Ntafis, V.; Ikonomopoulos, J.; Kokkinos, P.; Alvarez-Ordonez, A.; Jordan, K.; Delibato, E.; Kukier, E.; Sieradzki, Z.; Kwiatek, K.; Milanov, D.; Petrović, T.; Gonzalez-Garcia, P.; Lazaro, D. R.; Jackson, E. E.; Forsythe, S. J.; O’Brien, L.; Cook, N.
In: Food Analytical Methods, vol. 9, no. 11, pp. 2979-2985, 2016.

Book chapter

Viral Contamination of Food

In: Antimicrobial Food Packaging, pp. 65-79, 2016.

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Petrović, T.; D’Agostino, M.
In: Antimicrobial Food Packaging, pp. 65-79, 2016.

2015

Edited book

Molecular Microbial Diagnostic Methods: Pathways to Implementation for the Food and Water Industries

Academic Press, 2015. ISBN 9780124169999.

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Nigel Cook; Martin D’Agostino; K. Clive Thompson (editors)
Academic Press, 2015. ISBN 9780124169999.

Book chapter

Chapter highlights, future requirements, and conclusions

In: Molecular Microbial Diagnostic Methods: Pathways to Implementation for the Food and Water Industries, pp. 221-242, 2015.

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Cook, N.; D’Agostino, M.; Thompson, K. C.
In: Molecular Microbial Diagnostic Methods: Pathways to Implementation for the Food and Water Industries, pp. 221-242, 2015.

Journal article

A Loop-Mediated Isothermal Amplification-Based Method for Analysing Animal Feed for the Presence of Salmonella

In: Food Analytical Methods, vol. 8, no. 10, pp. 2409-2416, 2015.

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D’Agostino, M.; Diez-Valcarce, M.; Robles, S.; Losilla-Garcia, B.; Cook, N.
In: Food Analytical Methods, vol. 8, no. 10, pp. 2409-2416, 2015.

Book chapter

Foodborne Pathogens

In: Encyclopedia of Food and Health, pp. 83-86, 2015.

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D’Agostino, M.; Cook, N.
In: Encyclopedia of Food and Health, pp. 83-86, 2015.

Journal article

Monitoring of Extraction Efficiency by a Sample Process Control Virus Added Immediately Upon Sample Receipt

In: Food and Environmental Virology, vol. 7, no. 4, pp. 413-416, 2015.

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Ruhanya, V.; Diez-Valcarce, M.; D’Agostino, M.; Cook, N.; Hernández, M.; Rodríguez-Lázaro, D.
In: Food and Environmental Virology, vol. 7, no. 4, pp. 413-416, 2015.

Journal article

Virological fit-for-purpose risk assessment in a leafy green production enterprise

In: Food Control, vol. 51, pp. 333-339, 2015.

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Kokkinos, P.; Bouwknegt, M.; Verhaelen, K.; Willems, K.; Moloney, R.; de Roda Husman, A. M.; D’Agostino, M.; Cook, N.; Vantarakis, A.
In: Food Control, vol. 51, pp. 333-339, 2015.

2013

Book chapter

Quality control in the analytical laboratory: Analysing food- and waterborne viruses

In: Viruses in Food and Water: Risks, Surveillance and Control, pp. 126-138, 2013.

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D’Agostino, M. S.
In: Viruses in Food and Water: Risks, Surveillance and Control, pp. 126-138, 2013.

Journal article

Tracing enteric viruses in the European berry fruit supply chain

In: International Journal of Food Microbiology, vol. 167, no. 2, pp. 177-185, 2013.

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Maunula, L.; Kaupke, A.; Vasickova, P.; Söderberg, K.; Kozyra, I.; Lazic, S.; van der Poel, W. H. M.; Bouwknegt, M.; Rutjes, S.; Willems, K. A.; Moloney, R.; D’Agostino, M.; de Roda Husman, A. M.; von Bonsdorff, C. -H.; Rzezutka, A.; Pavlik, I.; Petrovic, T.; Cook, N.
In: International Journal of Food Microbiology, vol. 167, no. 2, pp. 177-185, 2013.

2012

Journal article

Harmonised Investigation of the Occurrence of Human Enteric Viruses in the Leafy Green Vegetable Supply Chain in Three European Countries

In: Food and Environmental Virology, vol. 4, no. 4, pp. 179-191, 2012.

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Kokkinos, P.; Kozyra, I.; Lazic, S.; Bouwknegt, M.; Rutjes, S.; Willems, K.; Moloney, R.; de Roda Husman, A. M.; Kaupke, A.; Legaki, E.; D’Agostino, M.; Cook, N.; Rzezutka, A.; Petrovic, T.; Vantarakis, A.
In: Food and Environmental Virology, vol. 4, no. 4, pp. 179-191, 2012.

Journal article

Multicenter Collaborative Trial Evaluation of a Method for Detection of Human Adenoviruses in Berry Fruit

In: Food Analytical Methods, vol. 5, no. 1, pp. 1-7, 2012.

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D’Agostino, M.; Cook, N.; Bartolo, I. Di; Ruggeri, F. M.; Berto, A.; Martelli, F.; Banks, M.; Vasickova, P.; Kralik, P.; Pavlik, I.; Kokkinos, P.; Vantarakis, A.; Söderberg, K.; Maunula, L.; Verhaelen, K.; Rutjes, S.; de Roda Husman, A. M.; Hakze, R.; der Poel, W. Van; Kaupke, A.; Kozyra, I.; Rzezutka, A.; Prodanov, J.; Lazic, S.; Petrovic, T.; Carratala, A.; Gironés, R.; Diez-Valcarce, M.; Hernandez, M.; Rodriguez-Lazaro, D.
In: Food Analytical Methods, vol. 5, no. 1, pp. 1-7, 2012.

Journal article

Virus hazards from food, water and other contaminated environments

In: FEMS Microbiology Reviews, vol. 36, no. 4, pp. 786-814, 2012.

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Rodríguez-Lázaro, D.; Cook, N.; Ruggeri, F. M.; Sellwood, J.; Nasser, A.; Nascimento, M. S. J.; D’Agostino, M.; Santos, R.; Saiz, J. C.; Rzezutka, A.; Bosch, A.; Gironés, R.; Carducci, A.; Muscillo, M.; Kovač, K.; Diez-Valcarce, M.; Vantarakis, A.; von Bonsdorff, C. -H.; de Roda Husman, A. M.; Hernández, M.; van der Poel, W. H. M.
In: FEMS Microbiology Reviews, vol. 36, no. 4, pp. 786-814, 2012.

2011

Journal article

Nucleic Acid Amplification-Based Methods for Detection of Enteric Viruses: Definition of Controls and Interpretation of Results

In: Food and Environmental Virology, vol. 3, no. 2, pp. 55-60, 2011.

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D’Agostino, M.; Cook, N.; Rodriguez-Lazaro, D.; Rutjes, S.
In: Food and Environmental Virology, vol. 3, no. 2, pp. 55-60, 2011.

Journal article

Surveillance of adenoviruses and noroviruses in European recreational waters

In: Water Research, vol. 45, no. 3, pp. 1025-1038, 2011.

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Wyn-Jones, A. P.; Carducci, A.; Cook, N.; D’Agostino, M.; Divizia, M.; Fleischer, J.; Gantzer, C.; Gawler, A.; Girones, R.; Höller, C.; de Roda Husman, A. M.; Kay, D.; Kozyra, I.; López-Pila, J.; Muscillo, M.; Nascimento, M. S. José; Papageorgiou, G.; Rutjes, S.; Sellwood, J.; Szewzyk, R.; Wyer, M.
In: Water Research, vol. 45, no. 3, pp. 1025-1038, 2011.

2009

Book chapter

Current Challenges in Molecular Diagnostics in Food Microbiology

In: Global Issues in Food Science and Technology, pp. 211–228, Elsevier, 2009, ISBN: 9780123741240.

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Rodríguez-Lázaro, David; Cook, Nigel; D’Agostino, Martin; Hernández, Marta
In: Global Issues in Food Science and Technology, pp. 211–228, Elsevier, 2009, ISBN: 9780123741240.

Book chapter

Harmonization and Validation of Methods in Food Safety – FOOD-PCR

In: Global Issues in Food Science and Technology, pp. 199–209, Elsevier, 2009, ISBN: 9780123741240.

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D’Agostino, Martin; Rodríguez-Lázaro, David
In: Global Issues in Food Science and Technology, pp. 199–209, Elsevier, 2009, ISBN: 9780123741240.

2007

Journal article

Trends in analytical methodology in food safety and quality: monitoring microorganisms and genetically modified organisms

In: Trends in Food Science and Technology, vol. 18, no. 6, pp. 306-319, 2007.

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Rodríguez-Lázaro, D.; Lombard, B.; Smith, H.; Rzezutka, A.; D’Agostino, M.; Helmuth, R.; Schroeter, A.; Malorny, B.; Miko, A.; Guerra, B.; Davison, J.; Kobilinsky, A.; Hernández, M.; Bertheau, Y.; Cook, N.
In: Trends in Food Science and Technology, vol. 18, no. 6, pp. 306-319, 2007.

2006

Journal article

An ultracentrifugation-based approach to the detection of hepatitis A virus in soft fruits

In: International Journal of Food Microbiology, vol. 108, no. 3, pp. 315-320, 2006.

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Rzezutka, A.; D’Agostino, M.; Cook, N.
In: International Journal of Food Microbiology, vol. 108, no. 3, pp. 315-320, 2006.

Journal article

Application of nucleic acid sequence-based amplification for the detection of viable foodborne pathogens: Progress and challenges

In: Journal of Rapid Methods and Automation in Microbiology, vol. 14, no. 3, pp. 218-236, 2006.

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Rodríguez-Lázaro, D.; Hernández, M.; D’Agostino, M.; Cook, N.
In: Journal of Rapid Methods and Automation in Microbiology, vol. 14, no. 3, pp. 218-236, 2006.

2005

Journal article

A centrifugation-based method for extraction of norovirus from raspberries

In: Journal of Food Protection, vol. 68, no. 9, pp. 1923-1925, 2005.

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Rzezutka, A.; Alotaibi, M.; D’Agostino, M.; Cook, N.
In: Journal of Food Protection, vol. 68, no. 9, pp. 1923-1925, 2005.

Correction

Erratum: Construction strategy for an internal amplification control for real-time diagnostic assays using nucleic acid sequence-based amplification: Development and clinical application (Journal of Clinical Microbiology (2004) 42:12 (5832-5836))

In: Journal of Clinical Microbiology, vol. 43, no. 2, 2005.

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Rodríguez-Lázaro, D.; D’Agostino, M.; Pla, M.; Cook, N.
In: Journal of Clinical Microbiology, vol. 43, no. 2, 2005.

Journal article

Real-time PCR-based methods for detection of Mycobacterium avium subsp. paratuberculosis in water and milk.

In: International journal of food microbiology, vol. 101, no. 1, pp. 93-104, 2005.

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Rodríguez-Lázaro, D.; D’Agostino, M.; Herrewegh, A.; Pla, M.; Cook, N.; Ikonomopoulos, J.
In: International journal of food microbiology, vol. 101, no. 1, pp. 93-104, 2005.

2004

Journal article

A molecular beacon-based real-time NASBA assay for detection of Mycobacterium avium subsp. paratuberculosis in water and milk

In: FEMS Microbiology Letters, vol. 237, no. 1, pp. 119–126, 2004, ISSN: 1574-6968.

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Rodríguez-Lázaro, David; Lloyd, Joy; Herrewegh, Arnold; Ikonomopoulos, John; D’Agostino, Martin; Pla, Maria; Cook, Nigel
In: FEMS Microbiology Letters, vol. 237, no. 1, pp. 119–126, 2004, ISSN: 1574-6968.

Journal article

A validated PCR-based method to detect Listeria monocytogenes using raw milk as a food model – Towards an international standard

In: Journal of Food Protection, vol. 67, no. 8, pp. 1646-1655, 2004.

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D’Agostino, M.; Wagner, M.; Vazquez-Boland, J. A.; Kuchta, T.; Karpiskova, R.; Hoorfar, J.; Novella, S.; Scortti, M.; Ellison, J.; Murray, A.; Fernandes, I.; Kuhn, M.; Pazlarova, J.; Heuvelink, A.; Cook, N.
In: Journal of Food Protection, vol. 67, no. 8, pp. 1646-1655, 2004.

Journal article

Construction strategy for an internal amplification control for real-time diagnostic assays using nucleic acid sequence-based amplification: Development and clinical application

In: Journal of Clinical Microbiology, vol. 42, no. 12, pp. 5832-5836, 2004.

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Authors & citation

Rodríguez-Lázaro, D.; D’Agostino, M.; Pla, M.; Cook, N.
In: Journal of Clinical Microbiology, vol. 42, no. 12, pp. 5832-5836, 2004.

Journal article

Multicenter validation of PCR-based method for detection of Salmonella in chicken and pig samples

In: Journal of AOAC International, vol. 87, no. 4, pp. 861-866, 2004.

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Malorny, B.; Cook, N.; D’Agostino, M.; Medici, D. De; Croci, L.; Abdulmawjood, A.; Fach, P.; Karpiskova, R.; Aymerich, T.; Kwaitek, K.; Kuchta, T.; Hoorfar, J.
In: Journal of AOAC International, vol. 87, no. 4, pp. 861-866, 2004.

Journal article

Validation of a PCR-based method for detection of food-borne thermotolerant campylobacters in a multicenter collaborative trial

In: Applied and Environmental Microbiology, vol. 70, no. 7, pp. 4379-4383, 2004.

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Josefsen, M. H.; Cook, N.; D’Agostino, M.; Hansen, F.; Wagner, M.; Demnerova, K.; Heuvelink, A. E.; Tassios, P. T.; Lindmark, H.; Kmet, V.; Barbanera, M.; Fach, P.; Loncarevic, S.; Hoorfar, J.
In: Applied and Environmental Microbiology, vol. 70, no. 7, pp. 4379-4383, 2004.

2000

Journal article

Predictions of growth for Listeria monocytogenes and Salmonella during fluctuating temperature

In: International Journal of Food Microbiology, vol. 59, no. 3, pp. 157-165, 2000.

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Bovill, R.; Bew, J.; Cook, N.; D’Agostino, M.; Wilkinson, N.; Baranyi, J.
In: International Journal of Food Microbiology, vol. 59, no. 3, pp. 157-165, 2000.